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                教授
                教授
                副教授
                青年教師
                實驗室腹部管理人員
                院辦人員
                團辦人員
                您當〗前所在位置:首頁?>?師資隊伍?>?在職教師?>?教授
                師資隊伍
                姓名: 童春發 系別: 林木遺傳实力定然不凡育種系
                職務: 教師 類別: 教授
                最終學歷: 博士研究▂生 最終學位: 農學博士
                辦公電話: 025-85428817-815 電子郵箱: tongchf@njfu.edu.cn
                 教育背景與损失是什么样工作(掛職)經歷:

                教育背景:
                    1999.09–2003.06    南京◣林業大學     林木遺傳育種     博士
                    1988.09–1991.06    湖南大學         應用數學        碩士
                    1986.09–1988.06    安徽教◥育學院     數學
                    1983.09–1986.06    合肥教☆育學院     數學

                工作經歷:
                    2011.06-至今       南京林業∩大學              林學院                 教授

                2009.10-2011.10   美國賓夕伐尼亞州立大學                            博士後
                    2008.06-2011.05     南京林業大學              森林資源與環境學院     副教授
                    2001.06-2008.05     南京林業大學              信息院                副教授
                    2000.09-2001.08     加拿大阿爾伯特大學        可再生●資源系           訪問學者
                    1994.06-2001.05     南京林業大學              信息院                講師
                    1991.07-1994.05     南京林業大學              基礎課部              助教


                 研究方向:
                1. 二代測序數據分析,包括基因組變異位點(SNP)識別、DNA序列拼接和轉錄組水平上基因註釋及差異表達分析。

                2. 林木遺傳圖譜構建和數量性狀基因(QTL)定位,包括分子標記連鎖分析、分群、排序和繪圖;QTL統計模型的建立、分析計算和軟件開發。

                3. 林木常規遺傳育種模型統計分析,包括配合力、育種值、遺傳力和遺傳相關系數等遺傳參數計算以及相應的軟件開發。


                 科研項目:
                1. 國困难家自然科學基金項目:利用雜交F2代群體和二代簡化基因組測序技ω 術構建楊樹整合的遺傳連鎖圖譜(31870654),2019.1~2020.12  

                2. 國家自然科學基金項目:林木數量性狀基因座功混乱着能作圖統計模型及其在楊樹中的應用(31270706),2013.1~2016.12

                3. 國家自然科學基金項目:林木不平衡試驗數據遺傳模型分析及應用(31070601), 2011.1~2013.12

                4. 國家自然科學基金項目:林木高質量遺傳圖譜構建和QTL精確定位統計方法及應用(30872051),2009.1~2011.12


                 成果與獎勵:

                代表性論著:

                1. Dan Yao, Hainan Wu, Yuhua Chen,Wenguo Yang, Hua Gao, Chunfa Tong*. 2018. gmRAD: an integrated SNP calling pipeline for genetic mapping with RADseq across a hybrid population. Briefings in Bioinformatics, doi: 10.1093/bib/bby114

                2. Shentong Tao, Jiyan Wu, Dan Yao, Yuhua Chen, Wenguo Yang, Chunfa Tong*. 2018. Identification of recombination events in outbred species with next-generation sequencing data. BMC Genomics, 19:398

                3. Fenxiang Liu, Chunfa Tong*, Shentong Tao, Jiyan Wu, Yuhua Chen, Dan Yao, Huogen Li, Jisen Shi. 2017. MVQTLCIM: composite interval mapping of multivariate traits in a hybrid F1 population of outbred species. BMC Bioinformatics, 18:515

                4. Mohaddeseh Mousavi,Chunfa Tong*,Fenxiang Liu,Shentong Tao,Jiyan Wu,Huogen Li,Jisen Shi. 2016. De novo SNP discovery and genetic linkage mapping in poplar using restriction site associated DNA and whole-genome sequencing technologies. BMC Genomics,17:656

                5. Chunfa Tong*, Huogen Li, Ying Wang, Xuran Li, Jiajia Ou, Deyuan Wang, Houxi Xu, Chao Ma, Xianye Lang, Guangxin Liu, Bo Zhang, Jisen Shi. 2016. Construction of High-Density Linkage Maps of Populus deltoids x P. simonii Using Restriction-Site Associated DNA Sequencing . PLOS ONE, doi: 10.1371/journal.pone.0150692

                6. Fang Xu#Chunfa Tong, Yafei Lyu, Wenhao Bo, Xiaoming Pang, Rongling Wu*. 2015. Allotetraploid and autotetraploid models of linkage analysis. Briefings in Bioinformatics,16:32-38

                7. 王德源, 童春發*.2015.林木多地點半同〓胞子代測定遺傳分析R語言程序包及其應用.南京林業【大學學報, 39(5):45-51

                8. Fang Xu#, Yafei Lyu#Chunfa Tong#, Wenhao Bo, Xuli Zhu, Danni Yin, Qin Yan, Jian Zhang, Xiaoming Pan, Christian M. Tobias, Rongling Wu*. 2014. A statistical model for QTL mapping in polysomic autotetraploids underlying double reduction. Briefings in Bioinformatics,15:1044-1056

                9. 童春發, 施季森.2014.林木遺傳模型統計分析及R語言實現.科學出是什么人版社

                10. Chunfa Tong,Lianying Shen,Yafei Lv,ZhongWang,XiaolingWang,Sisi Feng,Xin Li,Yihan Sui, Xiaoming Pang,RonglingWu*. 2014. Structural mapping: how to study the genetic architecture of a phenotypic trait through its formation mechanism. Briefings in Bioinformatics, 15:43-53

                11. 童春發,蔣安納,楊立偉,施季森*. 2014. WinNC2: 因子交配設↑計遺傳分析軟件. 林業科學,50 (1): 55-62.

                12. Zhongwen Huang, Chunfa Tong, Wenhao Bo, Xiaoming Pang, ZhongWang, Jichen Xu, Junyi Gai, RonglingWu*. 2014. An allometric model for mapping seed development in plants. Briefings in Bioinformatics, 15:562-570

                13. 童春發,楊立偉,蔣安納,施季森*. 2013. 不平衡巢式設計遺傳模型分析. 林業科學,49(1): 1-8.

                14. Chunfa Tong, Guangxin Liu, Liwei Yang, Jisen Shi*. 2012. GSCA: new software and algorithms to analyse diallel mating designs based on restricted linear model. Silvae Genetica, 61(3):126-132

                15. Chunfa Tong, Bo Zhang, Huogen Li, Jisen Shi*. 2012. Model selection for quantitative trait loci mapping in a full-sib family. Genetics and Molecular Biology, 35(3):622-631

                16. Xiyang Zhao#Chunfa Tong#, Xiaoming Pang#, Zhong Wang, Yunqian Guo, Fang Du,Rongling Wu*. 2012. Functional mapping of ontogeny in flowering plants. Briefings in Bioinformatics,13(3):317-328

                17. Chunfa Tong, Bo Zhang, Zhong Wang, Meng Xu, Xiaoming Pang, Jingna Si, Minren Huang, Rongling Wu*. 2011. Multiallelic epistatic model for an outbred cross and mapping algorithm of interactive quantitative trait loci. BMC Plant Biology, 11:148

                18. Chunfa Tong, Zhong Wang, Bo Zhang, Jishen Shi, Rongling Wu*. 2011. 3FunMap: Full-sib family functional mapping of dynamic traits. Bioinformatics, 27(14): 2006-2008

                19. Wu Rongling*Chunfa Tong, Zhong Wang. 2011. A conceptual framework for pharmacodynamic genome-wide association studies in pharmacogenomics. Drug Discovery Today, 16(19-20): 884-890

                20. Chunfa Tong, Bo Zhang, Jisen Shi*. 2010. A hidden Markov model approach to multilocus linkage analysis in a full-sib family. Tree Genetics and Genomes, 6:651-662

                21. 童春發,衛巍,尹輝,施季森*. 2010. 林木半同胞子代測定遺傳模型分析. 林業科學, 46(1):29-35

                22. Bo Zhang, Chunfa Tong, Tongming Yin, Xinye Zhang, Qiang Zhuge, Minren Huang, Mingxiu Wang, Rongling Wu*. 2009. Detection of quantitative trait loci influencing growth trajectories of adventitious roots in Populus using functional mapping. Tree Genetics and Genomes, 5:539-552

                23. 單文娟, 童春發, 施季森*. 2008. 基因话芯片篩選差異表達基因方法比較. 遺傳, 30(12):1640-1646

                24. Meng Zhou, Chunfa Tong, Jisen Shi*. 2007. Analysis of codon usage between different poplar species. Journal of Genetics and Genomics,34(6):555-561

                25. 施季森, 童春發. 2006. 林木遺傳圖譜構建和QTL定位統計分析. 科學出版社

                26. 童春發, 施季森*. 2004. 利用杉木的F1代群體構建遺傳連鎖圖譜. 遺傳學報, 31(10):1149-1156


                軟件著作權登記:

                1. 童春發,多元性狀復合區間QTL定位軟件mvqtlcim,2016SR307662,2016.06.16

                2. 劉粉香,童春發,林木全同胞群體多變○量QTL定位R語言程序mvqtlmap,2016SR317892,2016.05.06

                3. 王德源,童春發,林木半同胞子代測定育種值計算分↓析R語言程序HalfsibBV,2015SR151809,2015.05.05

                4. 王德源,童春發,林木多地點半同胞子代測定遺打了个结印傳分析R語言程序HalfsibMS,2015SR005301,2014.09.01

                5. 童春發,雙列雜交設計遺傳模型〗配合力分析軟件GSCA,2015SR028845,2011.12.01

                6. 童春發,因子交配設計遺傳模型分析軟件WinNC2,2014SR132488,2013.06.01


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